CASL Research Collection [62]

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Towards the Improved Discovery and Design of Functional Peptides: Common Features of Diverse Classes Permit Generalized Prediction of Bioactivity

Mooney, Catherine ; Haslam, Niall J. ; Pollastri, Gianluca ; Shields, Denis C. (PLOS, 2012-10)

The conventional wisdom is that certain classes of bioactive peptides have specific structural features that endow their particular functions. Accordingly, predictions of bioactivity have focused on particular subgroups, ...
Aggregating Content and Network Information to Curate Twitter User Lists

Greene, Derek ; Sheridan, Gavin ; Smyth, Barry ; Cunningham, Pádraig (ACM, 2012-06-25)

Twitter introduced user lists in late 2009, allowing users to be grouped according to meaningful topics or themes. Lists have since been adopted by media outlets as a means of organising content around news stories. Thus ...
Profile-based short linear protein motif discovery.

Haslam, Niall J. ; Shields, Denis C. (BioMed Central, 2012-05-18)

Background Short linear protein motifs are attracting increasing attention as functionally independent sites, typically 3-10 amino acids in length that are enriched in disordered regions of proteins. Multiple methods ...
Genetic Programming for the Induction of Seasonal Forecasts: A Study on Weather-derivatives

Agapitos, Alexandros ; O'Neill, Michael ; Brabazon, Anthony (Springer, 2012)

The last ten years has seen the introduction and rapid growth of a market in weather derivatives, financial instruments whose payoffs are determined by the outcome of an underlying weather metric. These instruments allow ...
Review of Statistical Network Analysis: Models, Algorithms, and Software

Salter-Townshend, Michael ; White, Arthur ; Gollini, Isabella ; Murphy, Thomas Brendan (Wiley-Blackwell, 2012-08)

The analysis of network data is an area that is rapidly growing, both within and outside of the discipline of statistics. This review provides a concise summary of methods and models used in the statistical analysis of ...