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Browsing Complex and Adaptive Systems Laboratory by Title
Now showing items 53-72 of 77
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(Elsevier, 2012-01-06)Short linear motifs in proteins (typically 3–12 residues in length) play key roles in protein–protein interactions by frequently binding specifically to peptide binding domains within interacting proteins. Their tendency ...
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(Elsevier, 2012-08-14)The ability of docking to predict angiotensin converting enzyme (ACE) inhibitory dipeptide sequences was assessed using AutoDock Vina. All potential dipeptides and phospho-dipeptides were docked and scored. Peptide intestinal ...
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(Springer, 2011-04-27)This paper investigates the effects of early stopping as a method to counteract overfitting in evolutionary data modelling using Genetic Programming. Early stopping has been proposed as a method to avoid model overtraining, ...
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(Springer, 2011-04)This paper investigates the effects of early stopping as a method to counteract overfitting in evolutionary data modelling using Genetic Programming. Early stopping has been proposed as a method to avoid model overtraining, ...
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(BioMed Central, 2012-05-18)Background Short linear protein motifs are attracting increasing attention as functionally independent sites, typically 3-10 amino acids in length that are enriched in disordered regions of proteins. Multiple methods ...
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(Mary Ann Liebert, 2006-10-24)A significant step towards establishing the structure and function of a protein is the prediction of the local conformation of the polypeptide chain. In this article, we present systems for the prediction of three new ...
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(IEEE, 2011-08-31)This paper presents an approach to the Mario AI Benchmark problem, using the A* algorithm for navigation, and an evolutionary process combining routines for the reactiveness of the resulting bot. The Grammatical Evolution ...
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(Bentham Science Publishers, 2009-01)Genetic Programming is a form of Natural Computing which adopts principles from neo-Darwinian evolution to automatically solve problems. It is a model induction method in that both the structure and parameters of the ...
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(Wiley-Blackwell, 2012-08)The analysis of network data is an area that is rapidly growing, both within and outside of the discipline of statistics. This review provides a concise summary of methods and models used in the statistical analysis of ...
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(Oxford University Press, 2011-08-27)Knowledge of the subcellular location of a protein provides valuable information about its function and possible interaction with other proteins. In the post-genomic era, fast and accurate predictors of subcellular location ...
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Semantically-based crossover in genetic programming : application to real-valued symbolic regression (Springer, 2011-06)We investigate the effects of semantically-based crossover operators in Genetic Programming, applied to real-valued symbolic regression problems. We propose two new relations derived from the semantic distance between ...
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(IEEE, 2011-10-14)Although many real world problems are dynamic in nature, the study of Genetic Programming in dynamic environments is still immature. This paper investigates the application of some recently proposed semantic-based crossover ...
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(2012)A joint model for annotation bias and document classification is presented in the context of media sentiment analysis. We consider an Irish online media data set comprising online news articles with user annotations of ...
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(Oxford University Press, 2010-07)Short, linear motifs (SLiMs) play a critical role in many biological processes, particularly in protein–protein interactions. The Short, Linear Motif Finder (SLiMFinder) web server is a de novo motif discovery tool that ...
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(Oxford University Press, 2011-05-26)Short, linear motifs (SLiMs) play a critical role in many biological processes. The SLiMSearch 2.0 (Short, Linear Motif Search) web server allows researchers to identify occurrences of a user-defined SLiM in a proteome, ...
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(Springer, 2010)Short, linear motifs (SLiMs) play a critical role in many biological processes. The SLiMSearch (Short, Linear Motif Search) webserver is a flexible tool that enables researchers to identify novel occurrences of pre- defined ...
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(Institute of Electrical and Electronic Engineers, 2012-05)This article gives a brief description of the Degenerate Unmixing Estimation Technique (DUET) and applies it in a geophysical setting. Source separation has not been fully addressed by geophysicists and is a crucial first ...
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(IEEE Press, 2010-07)Asset allocation is critical for the portfolio management process. In this paper, we solve a dynamic asset allocation problem through a multiperiod stochastic programming model. The objective is to maximise the expected ...
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(ACM, 2011)We present a novel application of Grammatical Evolution to the real-world application of femtocell coverage. A symbolic regression approach is adopted in which we wish to uncover an expression to automatically manage the ...
Now showing items 53-72 of 77